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0.1.1

Background

  • Gromov-Wasserstein Correspondences
  • Fused Gromov-Wasserstein Correspondences
  • Unbalanced Gromov-Wasserstein Correspondences
  • Local Geometric Distortion
  • Distortion Scaling

Examples

  • Example 1: Identifying switch regions in KRAS
  • Example 2: Detecting topologically non-trivial sequence rearrangements
  • Example 3: Clustering based on structural similarity

API

  • GW_protein
  • GW_protein_pI
  • FGW_matrices
  • LGD_Comparison
  • Switch Probabilities
  • Pymol Protein Viewer
  • Weighted Alignment
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